• U.S.A. \ University of Missouri-Columbia \ Department of Computer Enginee \ Ph.D(1992 ~ 1995)
• U.S.A \ University of Missouri-Columbia \ Department of Computer Enginee \ M.S.(1990 ~ 1992)
• R.O.C \ Taiwan University of Science and Technology \ Department of Electrical Engin \ B.S.(1987 ~ 1989)

• 國立成功大學醫學院附設醫院 \ 健康數據資源中心 \ 執行長 (2020 ~ now)
• 美國 \ 系統生物學研究院(ISB) \ 合聘教授 (2012 ~ now)
• 國立成功大學 \ 資訊工程學系 \ 教授 (1999 ~ now)
• 國立成功大學 \ 醫學院附設醫院資訊室 \ 主任 (2019 ~ 2019)
• 國立成功大學 \ 醫學院附設醫院 \ 資訊長 (2019 ~ 2020)
• 國立成功大學 \ 醫學院老年學研究所 \ 兼任教授 (2017 ~ 2020)
• 國立成功大學 \ 計算機與網路中心 \ 主任 (2013 ~ 2019)
• 國立成功大學 \ 圖書館 \ 副館長 (2009 ~ 2013)
• ITRI \ CCL \ Researcher (1995 ~ 1996)

• Outstanding ICT Elite Award 108.
• 榮獲成功大學特聘教授（連續四次，2012.8~)
• 中華民國大專校院資訊服務協會 常務理事(2016年～)
• ISO 27001 資訊安全管理制度-合格主導稽核員(Lead Auditor)(2016~)
• BS 10012 個人資訊管理制度-合格主導稽核員(Lead Auditor)(2015~)
• IEEE 計算智慧學會 「生醫工程與生物資訊技術委員會」主席(2012年~)
• IEEE 計算智慧學會 「生醫工程與生物資訊技術委員會」副主席(2010~2012年)
• 獲得美國李氏基金會2008-2009年傑出學者獎(Li Foundation Fellow)
• 指導學生 獲得2008年台灣實證醫學學會會議 最佳論文獎 (2008/09/20)
• 擔任高等教育評鑑中心 評鑑委員 (2007年~)
• 獲選台灣生物資訊學會常務理事 (2007年~)
• 獲選中華民國模糊學會第六屆理事 (2006~2009年)
• 獲選中華民國模糊學會理事 (2006~2009年)
• 擔任工程處資訊學門 複審委員 (2006年~2012年)
• 獲選中華民國人工智慧學會第七屆常務理事 (2005~2007年)
• Senior Member, IEEE Society (2004年~)

專書

1. 蔣榮先 "從A I到智慧醫療" 城邦集團商周出版社 2020年

Refereed Papers

1. Pei-Yi Hao, Jung-Hsien Chiang, Yu-De Chen "Possibilistic classification by support vector networks" Neural Networks,149,40-56,https://doi.org/10.1016/j.neunet.2022.02.007

2. Jung-Hsien Chiang, Chung-Yao Ma, Chi-Shiang Wang, Pei-Yi Hao "An Adaptive, Context-Aware, and Stacked Attention Network-Based Recommendation System to Capture Users Temporal Preference" IEEE Transactions on Knowledge and Data Engineering,DOI: 10.1109/TKDE.2022.3140387

3. Sina Abdollahi,Seyedeh Zahra Dehghanian,Liang-Yi Hung,Shiang-Jie Yang,Dao-Peng Chen,L Jeffrey Medeiros, Jung-Hsien Chiang, Kung-Chao Chang "Deciphering genes associated with diffuse large B-cell lymphoma with lymphomatous effusions: A mutational accumulation scoring approach" Biomark research, DOI: 10.1186/s40364-021-00330-8

4. Hui-O Chen,Peng-Chan Lin,Chen-Ruei Liu,Chi-Shiang Wang,Jung-Hsien Chiang "Contextualizing Genes by Using Text-Mined Co-Occurrence Features for Cancer Gene Panel Discovery" frontiers in Genetic,https://doi.org/10.3389/fgene.2021.771435

5. Sina Abdollahi, Peng-Chan Lin, Jung-Hsien Chiang "DiaDeL: An accurate deep learning-based model with mutational signatures for predicting metastasis stage and cancer types" IEEE/ACM Transactions on Computational Biology and Bioinformatics,DOI: 10.1109/TCBB.2021.3115504

6. Hsin-Hsiung Chang, Jung-Hsien Chiang, Cheng-Chung Chu "Data-Driven Generation of Medical-Research Hypotheses in Cancer Patients" 2021 IEEE 45th Annual Computers, Software, and Applications Conference (COMPSAC),626-631,DOI: 10.1109/COMPSAC51774.2021.00091

7. Chi-Shiang Wang,Bo-Syun Chen,Jung-Hsien Chiang "TDD-BPR: The topic diversity discovering on Bayesian personalized ranking for personalized recommender system" Neurocomputing,https://doi.org/10.1016/j.neucom.2021.02.016

8. Cheng-Yi Kao,Chiao-Yun Lin,Cheng-Chen Chao,Han-Sheng Huang,Hsing-Yu Lee,Chia-Ming Chang,Kang Sung,Ting Rong Chen,Po-Chang Chiang,Li-Ting Huang,Bow Wang,Yi-Sheng Liu,Jung-Hsien Chiang,Chien-Kuo Wang,Yi-Shan Tsai "Automated Radiology Alert System for Pneumothorax Detection on Chest Radiographs Improves Efficiency and Diagnostic Performance " Diagnostics,2021,11(7),1182；https://doi.org/10.3390/diagnostics11071182

9. Sina Abdollahi,Peng-Chan Lin,Jung-Hsien Chiang "WinBinVec: Cancer-Associated Protein-Protein Interaction Extraction and Identification of 20 Various Cancer Types and Metastasis Using Different Deep Learning Models" IEEE Journal of Biomedical and Health Informatics,DOI:10.1109/JBHI.2021.3093441

10. Chi-Shiang Wang, Fang-Yi Su, Tsung-Lu Michael Lee, Yi-Shan Tsai, Jung-Hsien Chiang "CUAB: Convolutional Uncertainty Attention Block Enhanced the Chest X-ray Image Analysis" arXiv preprint arXiv:2105.01840, https://doi.org/10.48550/arXiv.2105.01840

11. Peng-Chan Lin,Hui-O Chen,Chih-Jung Lee,Yu-Min Yeh,Meng-Ru Shen,Jung-Hsien Chiang "Comprehensive assessments of germline deletion structural variants reveal the association between prognostic MUC4 and CEP72 deletions and immune response gene expression in colorectal cancer patients " Human Genomics.DOI: 10.1186/s40246-020-00302-3

12. Sina Abdollahi, Peng-Chan Lin, Meng-Ru Shen, Jung-Hsien Chiang "Precise uncertain significance prediction using latent space matrix factorization models: genomics variant and heterogeneous clinical data-driven approaches " Briefings in Bioinformatics, bbaa281.https://doi.org/10.1093/bib/bbaa281

13. Ping-Yen Liu,Yi-Shan Tsai,Po-Lin Chen,Huey-Pin Tsai,Ling-Wei Hsu,Chi-Shiang Wang,Nan-Yao Lee,Mu-Shiang Huang,Yun-Chiao Wu,Wen-Chien Ko,Yi-Ching Yang,Jung-Hsien Chiang,Meng-Ru Shen "Application of an Artificial Intelligence Trilogy to Accelerate Processing of Suspected Patients With SARS-CoV-2 at a Smart Quarantine Station: Observational Study " Journal of Medical Internet Research 22(10):e19878J.doi:10.2196/19878

14. Mu-Shiang Huang, Chi-Shiang Wang, Jung-Hsien Chiang, Ping-Yen Liu, Wei-Chuan Tsai "Automated Recognition of Regional Wall Motion Abnormalities Through Deep Neural Network Interpretation of Transthoracic Echocardiography" Originally, DOI: 10.1161/CIRCULATIONAHA.120.047530

15. Kun-Hsing Yu, Tsung-Lu Michael Lee, Ming-Hsuan Yen, S. C. Kou, Bruce Rosen, Jung-Hsien Chiang, Isaac S. Kohane "Reproducible Machine Learning Methods for Lung Cancer Detection Using Computed Tomography Images" 2020, Journal of Medical Internet Research,22(8):e16709 doi:10.2196/16709

16. CHI-SHIANG WANG, SU FANG-YI, J. Chiang "MedCheX: An Efficient COVID-19 Detection Model for Clinical Usage" Journal of Information Science and Engineering

17. D.A. Devyatkin1, A.I. Molodchenkov1, A.V. Lukin1, Y.S. Kim, A.A. Boyko, P.A. Karalkin, J.-H. Chiang, G.D. Volkova, A.Yu. Lupatov "Towards Automated Meta-analysis of Biomedical Texts in the Field of Cell-based Immunotherapy " EXPERIMENTAL RESEARCH, 2(3) DOI: 10.18097/bmcrm001091

18. Pei-Yi Hao, Weng-Hang Cheang, Jung-Hsien Chiang "Real-time Event Embedding for POI Recommendation" Neurocomputing, DOI:10.1016/j.neucom.2019.04.022

19. Chia-Jung Yang, Jung-Hsien Chiang "Gene ontology concept recognition using named concept: understanding the various presentations of the gene functions in biomedical literature" Database: The Journal of Biological Databases and Curation

20. Kun-Hsing Yu, Tsung-Lu Michael Lee, Yu-Ju Chen, Christopher Re, Samuel C Kou, Jung-Hsien Chiang, Michael Snyder, Isaac S Kohane "A Cloud-Based Metabolite and Chemical Prioritization System for the Biology/Disease-driven Human Proteome Project" 2018, Journal of proteome research, 17(4)1383-1396 DOI: 10.1021/acs.jproteome.7b00772

21. Jui-Hung Chang, Chen-En Tsai, Jung-Hsien Chiang "Using Heterogeneous Social Media as Auxiliary Information to Improve Hotel Recommendation Performance" 2018, IEEE Access, 6 42647-42660 DOI:10.1109/ACCESS.2018.2855690

22. Yu Kun-Hsing, Lee Tsung-Lu Michael, Wang Chi-Shiang, Chen Yu-Ju, Re Christopher, Kou Samuel C., Chiang Jung-Hsien*, Kohane Isaac S., Snyder Michael "Systematic Protein Prioritization for Targeted Proteomics Studies through Literature Mining" 2018, Journal of proteome research, 17(4)1383-1396 DOI: 10.1021/acs.jproteome.7b00772

23. Chi-Shiang Wang, Pei-Ju Lin, Ching-Lan Cheng, Shu-Hua Tai,Yea-Huei Kao Yang, Jung-Hsien Chiang "Detecting potential adverse drug reactions using a deep neural network model" 2018, Journal of Medical Internet Research

24. Hsih-Te Yang, Jiun-Huang Ju, Yue-Ting Wong, Ilya Shmulevich, Jung-Hsien Chiang "Literature-based Discovery of New Candidates for Drug Repurposing" 2017, Briefings in bioinformatics, 18(3)488-497 doi: 10.1093/bib/bbw030

25. Kim YS, Kaidina AM, Chiang JH, Yarygin KN, Lupatov AY "Cancer Stem Cell Molecular Markers Verified in vivo" 2017, BIOCHEMISTRY MOSCOW-SUPPLEMENT SERIES B-BIOMEDICAL CHEMISTRY

26. G.Chin-Lun Hung, MS Li, Yen-Lin Chen, JH Chiang "Capturing depression with your smartphone: Validity and utilization of iHOPE for depressed patients in Taiwan" 2016, European Psychiatry,doi:10.1016/j.eurpsy.2016.01.758

27. Hsih-Te Yang, Jiun-Huang Ju, Yue-Ting Wong, Ilya Shmulevich, Jung-Hsien Chiang "Literature-based discovery of new candidates for drug repurposing" 2015, Briefings in bioinformatics,doi: 10.1093/bib/bbw030

28. Chiang, Jung-Hsien, Ju, Jiun-Huang 2014 "Discovering novel protein-protein interactions by measuring the protein semantic similarity from the biomedical literature" 2014, Journal Of Bioinformatics and Computational Biology,12(6)

29. Chiang, Jung-Hsien; Yang, Pei-Ching; Tu, Hsuan 2014 "Pattern analysis in daily physical activity data for personal health management" 2014, Pervasive and mobile computing, 13, 13-25

30. Jung-Hsien Chiang, Wan-Shu Cheng, Leroy Hood, and Qiang Tian 2014 "An Epigenetic Biomarker Panel for Glioblastoma Multiforme Personalized Medicine through DNA Methylation Analysis of Human Embryonic Stem Cell-like Signature" 2014, OMICS: A Journal of Integrative Biology, 18(5), 310-323

31. Jennifer M Holden, Ludek Koreny, Samson Obado, Alexander V Ratushny, Wei-Ming Chen, Jung-Hsien Chiang, Steven Kelly, Brian T Chait, John D Aitchison, Michael P Rout, Mark C Field 2014 "Nuclear pore complex evolution: a trypanosome Mlp analogue functions in chromosomal segregation but lacks transcriptional barrier activity" 2014, Molecular biology of the cell, 25(9), 1421-1436

32. JH Chiang*, CH Lin 2014 "NCS: Incorporating positioning data to quantify nucleosome stability in yeast" 2014, Bioinformatics, 30(6), 761-767

33. Samuel A Danziger*, Alexander V Ratushny, Jennifer J Smith, Ramsey A Saleem, Yakun Wan, Christina E Arens, Abraham M Armstrong, Katherine Sitko, Wei-Ming Chen, Jung-Hsien Chiang, David J Reiss, Nitin S Baliga*, John D Aitchison* 2014 "Molecular mechanisms of system responses to novel stimuli are predictable from public data" 2014, Nucleic acids research, 42(3), 1442-1460

34. Cheng, Wan-Shu; Chiang, Jung-Hsien 2013 "CGPredictor: a systematic integrated analytic tool for mining and examining genome-scale cancer independent prognostic epigenetic marker panels" 2013, Bmc Systems biology 7(6), S10

35. Wei-Ming Chen, Samuel A Danziger, Jung-Hsien Chiang, John D Aitchison* 2013 "PhosphoChain: A novel algorithm to predict kinase and phosphatase networks from high-throughput expression data" 2013, Bioinformatics 29(19), 2435-44

36. Liu T, Tsai C-H, Lee W-B, Chiang J-H 2013 "Optimizing Information in Next-Generation-Sequencing (NGS) Reads for Improving De Novo Genome Assembly" 2013, PLoS ONE, 8(7), e69503

37. Van de Vosse DW, Wan Y, Lapetina DL, Chen WM, Chiang JH, Aitchison JD, Wozniak RW 2013 "A Role for the Nucleoporin Nup170p in Chromatin Structure and Gene Silencing" 2013, CELL, 152(5), 969-983

38. Lee TLM, Chiang JH 2012 "A Systems Biology Approach to Solving the Puzzle of Unknown Genomic Gene-Function Association Using Grid-Ready SVM Committee Machines" 2012, Computational Intelligence Magazine, IEEE, 16(2), 1087-1095

39. Darby Tien-Hao Chang, Chao-Hsuan Ke, Jung-Hsin Lin and Chiang, J.H 2012 "AutoBind: automatic extraction of protein–ligand-binding affinity data from biological literature" 2012, Bioinformatics,28, 2162-2168

40. Wan, YK ;Chen, WM; Xing, Jie ;Tan, JY ;Li, Bing ;Chen, HY;Lin, ZX; Chiang, JH; Saleem Ramsey 2011 "Transcriptome profiling reveals a novel role for trichostatin A in antagonizing histone chaperone Chz1 mediated telomere anti-silencing" 2011, FEBS Letters,585(15), 2519-2525

41. Lin, JW, Chang, CH ; Lin, MW, Ebell, MH, Chiang, JH 2011 "Automating the process of critical appraisal and assessing the strength of evidence with information extraction technology" 2011, JOURNAL OF EVALUATION IN CLINICAL PRACTICE, 17(4), 832-838

42. Chiang, JH;Liu, HH;Huang, YT 2011 "Condensing biomedical journal texts through paragraph ranking" 2011, BIOINFORMATICS,27(8), 1143-1149

43. Yeh, CY; Shin, SM; Yeh, HH; Wu, TJ; Shin, JW; Chang, TY; Raghavaraju, G; Lee, CT; Chiang, JH; Tseng, VS; Lee, YCG; Shen, CH; Chow, NH; Liu, HS 2011 "Transcriptional activation of the Axl and PDGFR-alpha by c-Met through a ras- and Src-independent mechanism in human bladder cancer" 2011, BMC CANCER,11(139)

44. Chao, SY; Chiang, JH; Huang, AM;Chang, WS 2011 "An integrative approach to identifying cancer chemoresistance-associated pathways" 2011, BMC MEDICAL GENOMICS,4(23)

45. Wan, YK ;Chiang, JH ;Lin, CH; Arens, CE ; Saleem, RA ; Smith, JJ ; Aitchison, JD 2010 "Histone chaperone Chz1p regulates H2B ubiquitination and subtelomeric anti-silencing" 2010, Nucleic Acids Res, 38, 1431 – 1440

46. Chiang, JH;Lin, JW;Yang, CW 2010 "Automated evaluation of electronic discharge notes to assess quality of care for cardiovascular diseases using Medical Language Extraction and Encoding System (MedLEE)" 2010, JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION,17 (3) 245-252

47. Hao, PY;Chiang, JH;Lin, YH 2009 "A new maximal-margin spherical-structured multi-class support vector machine" 2009, APPLIED INTELLIGENCE, 30(2), 98-111

48. Wan, YK;Saleem, RA; Ratushny, AV; Roda, O; Smith, JJ; Lin, CH; Chiang, JH and Aitchison, JD 2009 "Role of the Histone Variant H2A.Z/Htz1p in TBP Recruitment, Chromatin Dynamics, and Regulated Expression of Oleate-Responsive Genes" 2009, Molecular and Cellular Biology, 29, 2346-2358

49. Majetl, R;Becker, MW;Tian, Q; Lee, TLM; Yan, XW; Liu, R; Chiang, JH; Hood, L;Clarke, MF and Weissman, IL 2009 "Dysregulated gene expression networks in human acute myelogenous leukemia stem cells" 2009, Proceedings of the National Academy of Sciences of the United States of America, 106, 3396-3401

50. Yin, ZX;Chiang,JH 2008 "Novel Algorithm for Coexpression Detection in Time-Varying Microarray Data Sets" 2008, IEEE/ACM Trans on Computational Biology and Bioinformatics, 5(1), 120-135

51. Chiang,JH ;Ho, SH 2008 "A combination of rough-based feature selection and RBF neural network for classification using gene expression data" 2008, IEEE Trans on Nanobioscience, 7(1), 91-99

52. Hao, PY, Chiang,JH 2008 "Fuzzy regression analysis by support vector learning approach" 2008, IEEE Trans. on Fuzzy Systems, 16(2), 428-441

53. Chiang,JH ;Ho, SH; Wang, WH 2008 "Similar genes discovery system (SGDS): Application for predicting possible pathways by using GO semantic similarity measure" 2008, Expert Systems With Applications, 35(3), 1115-1121

54. Chiang,JH;Chao,SY 2007 "Modeling Human Cancer-Related Regulatory Modules by GA-RNN Hybrid Algorithms" 2007, BMC Bioinformatics, 8:91

55. Chiang,JH ;Yin,ZX 2007 "Unsupervised minor prototype detection using an adaptive population partitioning algorithm" 2007, Pattern Recognition, 40, 3132-3145

56. Chiang,JH; Liu, HS; Chao,SY; Chen,CY 2007 "Discovering Gene-Gene Relations from Sequential Sentence Patterns in Biomedical Literature" 2007, Expert Systems With Applications, 33, 1036-1041

57. Hao,PY; Chiang,JH;Tu,YK 2007 "Hierarchically SVM Classification Based on Support Vector Clustering Method and Its Application to Document Categorization" 2007, Expert Systems With Applications, 33, 627-635

58. Chiang,JH; Shin,JW ;Liu, HH; Chin,CL 2006 "GeneLibrarian:an effective gene-information summarization and visualization system" 2006, BMC Bioinformatics, 7:392

59. Hao, PY;Chiang,JH 2006 "Pruning and model-selecting algorithms in the RBF frameworks constructed by support vector learning" 2006, International Journal of Neural Systems, 16(4), 283-293

60. Chiang,JH;Yu,HC 2005 "Literature Extraction of Protein Functions Using Sentence Pattern Mining" 2005, IEEE Trans. on Knowledge and Data Engineering, 17(8), 1088-1098

61. Chiang,JH ;Hao,PY 2004 "Support Vector Learning Mechanism for Fuzzy Rule-Based Modeling: A New Approach" 2004, IEEE Trans. on Fuzzy Systems, 12(1), 1-12

62. Chiang,JH ;Yu,HC; Hsu,HJ 2004 "GIS: A Biomedical Text-Mining System for Gene Information Discovery" 2004, Bioinformatics, 20(1), 120-121

63. Chiang,JH;Yin, ZX 2004 "A New Fuzzy Cover Approach to Clustering" 2004, IEEE Trans. on Fuzzy Systems, 12(2), 199-208